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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845115.1_cds_XP_016509216.1_22166
CDS Infomation

[gene=LOC107826713] [db_xref=GeneID:107826713] [protein=aspartate--tRNA ligase, chloroplastic/mitochondrial-like] [exception=annotated by transcript or proteomic data] [protein_id=XP_016509216.1] [location=join(5681..6067,7014..7157,8653..8762,9960..10071,10256..10327,10709..10800,11043..11163,12743..12865,13354..13549,13884..14071,14190..>14231)] [gbkey=CDS]
Sequence

ATGTCCCTCTTCTTCCGTTCCTTACCCACCATAGGTCTTCGCTCAAAACCTTCCCCTCTC
ACTTCTCTACCTTTCTTTTTCCTTAATAATTTCCACAACCACCCCATTATTATTACCCCA
ACTTCACTTATCAGTAGCCGCACACTTTCTTCCGCCTCTGCCACTGGTCCTTTAACTTCC
GTTGAAACACTTACCCCTAGCACCAAAACTTCTCTATCTCCTACAACTGCTGATACTCTT
CAATGGGTTAGCAGGACTCAATACTGTGGTGAATTATCCGATAACGATGTGGGTAAACGG
GTTCGACTTTGCGGGTGGGTCGCCCTTCATCGGATTCATGGTGGTTTGACTTTTGTCAAC
CTCAGGGACCAAACTGGAATTGTTCAGATTACGACACTTCCTGATGATTTTCCTGATGCT
CATTCTGCTGTGAGCGATCTGAGGCTTGAATATGTCGTTGCCATTGAAGGTGTTGTTCGG
CCTAGGCCAGCTGACTCTGCCAACAAAAAGATGAAAACTGGCACGATAGAGGTTGCTGCA
GAGGATGTCCAGGTGTTGAATGCAGTAAGATTGAAGTTGCCCTTCTTGGTAACAACTGCA
GACGATGCAAAAGATTCAGCTAAGGAAGAAATCAGATTGCGATATCGATGCCTTGATTTA
CGCCGTCCACAAATGAACTCAAATATAATCTTGCGACATAGAGTAGTGAAACTTCTCCGA
AGATACCTAGAAGATGTGCATGGTTTTGTCGAGATTGAGACTCCAATACTATCTAGATCT
ACTCCTGAAGGTGCTCGTGATTATTTGGTCCCTTCTAGAGTTCAGCCAGGAACATTTTAT
GCACTACCCCAGAGTCCTCAGCTGTTCAAGCAAATGCTAATGGTCTCTGGTTTTGATAAG
TACTATCAAATAGCAAGGTGCTTTAGGGATGAAGATTTGAGAGCTGACAGACAACCTGAG
TTTACACAGCTAGATATAGAAATGGCTTTCACTTCTATGGAGGACATGCTGAAACTCAAT
GAGGATTTGATTAGAAAGGTTTTTCAGGAAATCCAAGGTGTCCAACTGCCAAATCCTTTT
CCAAGGCTTACATATGCTGAAGCAATGAGTCGATATGGTTCAGATAGACCAGATACTCGT
TTTGATGTCGAATTGAGAGATGTGTCCGGCATTTTCTCCAATTCCACATTCAAGGTTTTC
TCAGATGCCTTAGCAAGTGGAGGAATTATTAAGGCCTTATGTGTGCCTTCTGGGACAAAA
ACTTATTCAAATACTTCTTTGAAGAAAGGCGACATATGTAAAGAAGCAATCAAATCTGGG
GCAAAGGGTTTGCCTTTTTTAAAGGTCTTGAATGATGGGAGCATTGAAGGGATTCCCCAG
CTGGTTTCTAGTTTGGATACGGAAAAGAAAGAGGAATTGCTGAATCAGTTGTCTGCGGTA
CCAGATGATCTTATCTTGTTTGCTGTTGGTCACTATGCAGAAGTCAATAAAACTTTGGAT
CGTCTGAGAACATATGTAGCACACGAATTGGGTTTAATTGACAATTCCAGGCATTCAATA
CTCTGGGTGACTGACTTTCCAATGTTT

Peptide Sequence

PEP ID

XP_016509216.1
PEP Infomation

PREDICTED: aspartate--tRNA ligase, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MSLFFRSLPTIGLRSKPSPLTSLPFFFLNNFHNHPIIITPTSLISSRTLSSASATGPLTS
VETLTPSTKTSLSPTTADTLQWVSRTQYCGELSDNDVGKRVRLCGWVALHRIHGGLTFVN
LRDQTGIVQITTLPDDFPDAHSAVSDLRLEYVVAIEGVVRPRPADSANKKMKTGTIEVAA
EDVQVLNAVRLKLPFLVTTADDAKDSAKEEIRLRYRCLDLRRPQMNSNIILRHRVVKLLR
RYLEDVHGFVEIETPILSRSTPEGARDYLVPSRVQPGTFYALPQSPQLFKQMLMVSGFDK
YYQIARCFRDEDLRADRQPEFTQLDIEMAFTSMEDMLKLNEDLIRKVFQEIQGVQLPNPF
PRLTYAEAMSRYGSDRPDTRFDVELRDVSGIFSNSTFKVFSDALASGGIIKALCVPSGTK
TYSNTSLKKGDICKEAIKSGAKGLPFLKVLNDGSIEGIPQLVSSLDTEKKEELLNQLSAV
PDDLILFAVGHYAEVNKTLDRLRTYVAHELGLIDNSRHSILWVTDFPMFEWNDSEQRFEA
LHHPFTAPNPDDINDLSSARALAYDMVYNGVEIGGGSLRIYKREVQEKVLNIVGISREQA
EAKFGYLLEALDMGAPPHGGIAYGLDRLVMLLAGTNSIRDVIAFPKTTTAHCALTRSPSE
VDPQQLKDLSLQKM

Transcript Sequence

Gene sequence data has not been registered.